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GSE26020
Crosstalk between gene body DNA methylation, H3K9me3 and H3K36me3 chromatin marks and transcription
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Homo sapiens
3 Downloadable Samples
Affymetrix Human Exon 1.0 ST Array [transcript (gene) version (huex10st), Affymetrix Human Gene 1.0 ST Array (hugene10st)
Submitter Supplied Information
Description
This SuperSeries is composed of the SubSeries listed below.
PubMed ID
21526191
Publication Title
Relationship between gene body DNA methylation and intragenic H3K9me3 and H3K36me3 chromatin marks.
Total Samples
24
Submitter’s Institution
City of Hope National Medical Center
Authors
Hahn MA
,
Wu X
,
Li AX
,
Hahn T
,
Pfeifer GP
Source Repository
Gene Expression Omnibus (GEO)
Samples
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Accession Code
Title
Specimen part
Cell line
Processing Information
Additional Metadata
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GSM638367
cDNA form HBEC biological triplicate#1
human bronchial epithelia cells
hbec
Affymetrix SCAN
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GSM638368
cDNA form HBEC biological triplicate#2
human bronchial epithelia cells
hbec
Affymetrix SCAN
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GSM638369
cDNA form HBEC biological triplicate#3
human bronchial epithelia cells
hbec
Affymetrix SCAN
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Sample not processed
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GSM639489
HBEC H3K36me3
human bronchial epitelia cells
hbec
NA
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Sample not processed
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GSM639463
cDNA from HBEC after transcfection with noncoding siRNA
human bronchial epithelia cells
hbec
NA
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Sample not processed
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GSM639480
HCT116-DKO H3K36me3
colon cancer cell
hct116
NA
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Sample not processed
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GSM639477
HBEC H3K4me3
human bronchial epitelia cells
hbec
NA
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Sample not processed
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GSM639487
HBEC H3K27me3
human bronchial epitelia cells
hbec
NA
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Sample not processed
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GSM639484
HBEC siRNA SETD2 H3K36me3
human bronchial epitelia cells
hbec
NA
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Sample not processed
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GSM639464
cDNA from HBEC after transcfection with SETD2 siRNA
human bronchial epithelia cells
hbec
NA
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