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Accession IconGSE35711

Transcriptional Signatures as a Disease-Specific and Predictive Inflammatory Biomarker for Type 1 Diabetes [CF_S1S3_5Auto_20CF_10HC]

Organism Icon Homo sapiens
Sample Icon 49 Downloadable Samples
Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

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Description
The complex milieu of inflammatory mediators associated with many diseases is often too dilute to directly measure in the periphery, necessitating development of more sensitive measurements suitable for mechanistic studies, earlier diagnosis, guiding selection of therapy, and monitoring interventions. Previously, we determined that plasma of recent-onset (RO) Type 1 diabetes (T1D) patients induce a proinflammatory transcriptional signature in fresh peripheral blood mononuclear cells (PBMC) relative to that of unrelated healthy controls (HC). Here, using an optimized cryopreserved PBMC-based protocol, we compared the signature found between unrelated healthy controls and non-diabetic cystic fibrosis patients possessing Pseudomonas aeruginosa pulmonary tract infection.
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Total Samples
49
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UPN727 cells, healthy control 1265 plasma
UPN727 cells, healthy control 284 plasma
UPN727 cells, cystic fibrosis patient CF4087 plasma
UPN727 cells, healthy control 233 plasma
UPN727 cells, healthy control 1259 plasma
UPN727 cells, healthy control 294 plasma
UPN727 cells, autologous plasma, biological replicate 1
UPN727 cells, autologous plasma, biological replicate 5
UPN727 cells, healthy control 381 plasma
UPN727 cells, cystic fibrosis patient CF4285 plasma
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