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SRP026334
Arabidopsis thaliana
8 Downloadable Samples
Illumina HiSeq 2000
Description
The sRNA profiles of the leaf and the root of 20-day-old plants were sequenced and the impacts of high energy status on sRNA expression were analyzed Overall design: 8 samples consisting of wild type, overexpressed line 7 and 21, and AtPAP2-mutant.
Publication Title
Global small RNA analysis in fast-growing Arabidopsis thaliana with elevated concentrations of ATP and sugars.
Sample Metadata Fields
Subject
View Samples- Mus musculus
- 15 Downloadable Samples
Affymetrix Mouse Genome 430 2.0 Array (mouse4302)
Description
A mouse model for human small cell lung carcinoma (SCLC) has been developed based on evidence in human tumors that the tumor suppressor functions of RB and p53 are defective in more than 90% of SCLC cases. We also developed another mouse model also combines loss of p130 (Rbl2), an RB-related gene, with deletion of RB and p53. These two mouse tumors were shown to closely resemble human SCLC.
Publication Title
Loss of p130 accelerates tumor development in a mouse model for human small-cell lung carcinoma.
Sample Metadata Fields
Specimen part
View Samples- Homo sapiens
- 384 Downloadable Samples
- IlluminaHiSeq2000
Description
We report a new unsupervised clustering tool for single cell RNA-seq data called SC3. We show that biologically relevant information can be obtained from preneoplastic cells of patients with myeloprolifertive disease. Overall design: examination of three different patients with myeloproloferative disease
Publication Title
SC3: consensus clustering of single-cell RNA-seq data.
Sample Metadata Fields
No sample metadata fields
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